Gene detail information of Glyur000297s00023394.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34300.11.00E-105lectin protein kinase family protein
NRXP_004498719.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum]
COGYP_003797667.11.00E-23putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|Q9XID3|Y1343_ARATH1.00E-120G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBLtr|I1KKX7|I1KKX7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G27370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00297114132116552-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000297s00023394.1PF01453.19B_lectin841658.30E-08
Glyur000297s00023394.1PF00954.15S_locus_glycop2282991.30E-07
Glyur000297s00023394.1PF00069.20Pkinase4957831.00E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.905
SRR1783600control5.095
SRR1783602moderate drought stress4.281
SRR1811619moderate drought stress4.166

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.657
DRR006520Root Summer glycyrrhizin high producing strain3.693
DRR006521Root Winter glycyrrhizin high producing strain5.876
DRR006522Root Winter glycyrrhizin high producing strain5.921
DRR006523Root Summer glycyrrhizin low producing strain8.049
DRR006524Root Summer glycyrrhizin low producing strain7.850
DRR006525Leaf Summer glycyrrhizin high producing strain10.457
DRR006526Leaf Summer glycyrrhizin high producing strain10.477

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.520
SRR2868004Drought Stress(Tissue:root)69.813
SRR2967015Control (Tissue:root)50.628

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.758
SRR9715740Leave8.837
SRR9715741Leave18.315
SRR9715739Root6.563
SRR9715742Root12.508
SRR9715743Root10.051

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.863
SRR8749028MeJA induced 9h28.252
SRR8749029MeJA induced 9h18.653
SRR8749030Uninduced72.881
SRR8749031Uninduced59.427
SRR8749032Uninduced39.857

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.541
SRR8400027Control-Root22.100

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved