Gene detail information of Glyur000297s00023400.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G35840.31.00E-165Sucrose-6F-phosphate phosphohydrolase family protein
NRXP_004497625.10PREDICTED: sucrose-phosphatase 1-like [Cicer arietinum]
COGYP_001517199.16.00E-59sucrose phosphatase [Acaryochloris marina MBIC11017]
Swissprottr|Q5IH14|SPP1_TOBAC0Sucrose-phosphatase 1
trEMBLtr|Q9FQ10|Q9FQ10_MEDTR0Sucrose-phosphatase {ECO:0000313|EMBL:AAG31076.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00297156456159929-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07024SPP EC:3.1.3.24 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005986  sucrose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0016791  phosphatase activity

GO:0050307  sucrose-phosphate phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000297s00023400.1PF05116.8S6PP92615.30E-103
Glyur000297s00023400.1PF08472.5S6PP_C2623949.70E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.678
SRR1783600control57.022
SRR1783602moderate drought stress31.077
SRR1811619moderate drought stress31.085

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain68.377
DRR006520Root Summer glycyrrhizin high producing strain67.953
DRR006521Root Winter glycyrrhizin high producing strain27.705
DRR006522Root Winter glycyrrhizin high producing strain26.836
DRR006523Root Summer glycyrrhizin low producing strain34.813
DRR006524Root Summer glycyrrhizin low producing strain34.732
DRR006525Leaf Summer glycyrrhizin high producing strain121.017
DRR006526Leaf Summer glycyrrhizin high producing strain120.613

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)74.371
SRR2868004Drought Stress(Tissue:root)64.946
SRR2967015Control (Tissue:root)50.067

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.923
SRR9715740Leave81.340
SRR9715741Leave71.260
SRR9715739Root31.608
SRR9715742Root38.799
SRR9715743Root39.959

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.880
SRR8749028MeJA induced 9h46.973
SRR8749029MeJA induced 9h29.986
SRR8749030Uninduced18.568
SRR8749031Uninduced9.782
SRR8749032Uninduced12.338

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.872
SRR8400027Control-Root65.895

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved