Gene detail information of Glyur000298s00025033.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24200.12.00E-180FAD/NAD(P)-binding oxidoreductase family protein
NRXP_004492209.10PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like isoform X1 [Cicer arietinum]
COGYP_114193.11.00E-67FAD-binding monooxygenase [Methylococcus capsulatus str. Bath]
trEMBLtr|V7B491|V7B491_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW12707.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002987796785809+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06126COQ6 EC:1.14.13.- Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0006744  ubiquinone biosynthetic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016709  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000298s00025033.1PF13450.1NAD_binding_8771149.70E-05
Glyur000298s00025033.1PF01494.14FAD_binding_32233192.10E-06
Glyur000298s00025033.1PF01494.14FAD_binding_33704204.70E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.104
SRR1783600control8.307
SRR1783602moderate drought stress10.400
SRR1811619moderate drought stress10.638

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.973
DRR006520Root Summer glycyrrhizin high producing strain10.147
DRR006521Root Winter glycyrrhizin high producing strain12.655
DRR006522Root Winter glycyrrhizin high producing strain12.169
DRR006523Root Summer glycyrrhizin low producing strain8.033
DRR006524Root Summer glycyrrhizin low producing strain8.340
DRR006525Leaf Summer glycyrrhizin high producing strain14.024
DRR006526Leaf Summer glycyrrhizin high producing strain13.635

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.586
SRR2868004Drought Stress(Tissue:root)13.159
SRR2967015Control (Tissue:root)12.031

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.542
SRR9715740Leave19.006
SRR9715741Leave20.282
SRR9715739Root2.719
SRR9715742Root8.103
SRR9715743Root7.277

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.238
SRR8749028MeJA induced 9h6.821
SRR8749029MeJA induced 9h5.458
SRR8749030Uninduced3.778
SRR8749031Uninduced2.153
SRR8749032Uninduced2.307

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.649
SRR8400027Control-Root14.385

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved