Gene detail information of Glyur000298s00025038.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G12250.22.00E-120TGACG motif-binding factor 6
NRXP_007133721.10hypothetical protein PHAVU_011G203400g [Phaseolus vulgaris]
Swissprottr|O24160|TGA21_TOBAC0TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBLtr|Q93XA1|Q93XA1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW05715.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00298167007177566+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000298s00025038.2PF00170.16bZIP_11822243.50E-07
Glyur000298s00025038.2PF14144.1DOG12653434.80E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.409
SRR1783600control25.357
SRR1783602moderate drought stress28.245
SRR1811619moderate drought stress27.869

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.438
DRR006520Root Summer glycyrrhizin high producing strain24.002
DRR006521Root Winter glycyrrhizin high producing strain17.977
DRR006522Root Winter glycyrrhizin high producing strain17.777
DRR006523Root Summer glycyrrhizin low producing strain29.371
DRR006524Root Summer glycyrrhizin low producing strain29.579
DRR006525Leaf Summer glycyrrhizin high producing strain16.215
DRR006526Leaf Summer glycyrrhizin high producing strain16.141

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.383
SRR2868004Drought Stress(Tissue:root)58.458
SRR2967015Control (Tissue:root)52.251

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.860
SRR9715740Leave32.869
SRR9715741Leave36.566
SRR9715739Root16.901
SRR9715742Root26.433
SRR9715743Root27.305

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.034
SRR8749028MeJA induced 9h26.688
SRR8749029MeJA induced 9h32.996
SRR8749030Uninduced28.256
SRR8749031Uninduced21.348
SRR8749032Uninduced27.622

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.014
SRR8400027Control-Root39.117

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved