Gene detail information of Glyur000300s00017245.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48930.13.00E-168hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
NRXP_003543709.10PREDICTED: shikimate O-hydroxycinnamoyltransferase [Glycine max]
Swissprottr|Q8GSM7|HST_TOBAC0Shikimate O-hydroxycinnamoyltransferase
trEMBLtr|A4F1S2|A4F1S2_CLITE0Putative acyltransferase {ECO:0000313|EMBL:BAF49305.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003002595932105-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13065E2.3.1.133, HCT EC:2.3.1.133 Phenylpropanoid biosynthesis map00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0016747  transferase activity, transferring acyl groups other than amino-acyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000300s00017245.1PF02458.10Transferase262962.00E-69
Glyur000300s00017245.1PF02458.10Transferase2984176.00E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.783
SRR1783600control2.609
SRR1783602moderate drought stress2.134
SRR1811619moderate drought stress2.077

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.184
DRR006520Root Summer glycyrrhizin high producing strain5.006
DRR006521Root Winter glycyrrhizin high producing strain2.066
DRR006522Root Winter glycyrrhizin high producing strain2.197
DRR006523Root Summer glycyrrhizin low producing strain5.447
DRR006524Root Summer glycyrrhizin low producing strain5.583
DRR006525Leaf Summer glycyrrhizin high producing strain2.366
DRR006526Leaf Summer glycyrrhizin high producing strain2.158

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.714
SRR2868004Drought Stress(Tissue:root)27.631
SRR2967015Control (Tissue:root)18.993

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.433
SRR9715740Leave1.187
SRR9715741Leave1.716
SRR9715739Root2.819
SRR9715742Root2.132
SRR9715743Root1.893

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.713
SRR8749028MeJA induced 9h3.641
SRR8749029MeJA induced 9h1.173
SRR8749030Uninduced1.729
SRR8749031Uninduced0.995
SRR8749032Uninduced2.845

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.808
SRR8400027Control-Root11.217

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved