Gene detail information of Glyur000300s00017254.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03220.1 | 1.00E-133 | fucosyltransferase 1 |
| NR | XP_004486606.1 | 0 | PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9M5Q1|FUT1_PEA | 4.00E-174 | Galactoside 2-alpha-L-fucosyltransferase |
| trEMBL | tr|A0A072TWL5|A0A072TWL5_MEDTR | 0 | Galactoside 2-alpha-L-fucosyltransferase-like protein {ECO:0000313|EMBL:KEH21278.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00300 | 82252 | 85596 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT37 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000300s00017254.1 | PF03254.8 | XG_FTase | 117 | 572 | 1.40E-197 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.270 |
| SRR1783600 | control | 9.075 |
| SRR1783602 | moderate drought stress | 7.880 |
| SRR1811619 | moderate drought stress | 7.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.637 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.574 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.963 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.640 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.112 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.635 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.960 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.222 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.836 |
| SRR2967015 | Control (Tissue:root) | 18.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.548 |
| SRR9715740 | Leave | 5.063 |
| SRR9715741 | Leave | 4.441 |
| SRR9715739 | Root | 1.013 |
| SRR9715742 | Root | 3.982 |
| SRR9715743 | Root | 3.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.415 |
| SRR8749028 | MeJA induced 9h | 24.610 |
| SRR8749029 | MeJA induced 9h | 20.767 |
| SRR8749030 | Uninduced | 14.758 |
| SRR8749031 | Uninduced | 9.701 |
| SRR8749032 | Uninduced | 9.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.852 |
| SRR8400027 | Control-Root | 8.279 |