Gene detail information of Glyur000301s00024488.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23240.12.00E-36ethylene response factor 1
NRAFK41308.11.95E-77unknown [Lotus japonicus]
Swissprottr|Q8LDC8|ERF92_ARATH1.00E-60Ethylene-responsive transcription factor 1B
trEMBLtr|I3SM16|I3SM16_LOTJA7.00E-78Uncharacterized protein {ECO:0000313|EMBL:AFK41308.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003019671797376+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000301s00024488.1PF00847.15AP2911191.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.655
SRR1783600control2.919
SRR1783602moderate drought stress8.891
SRR1811619moderate drought stress8.907

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.000
DRR006520Root Summer glycyrrhizin high producing strain8.640
DRR006521Root Winter glycyrrhizin high producing strain34.829
DRR006522Root Winter glycyrrhizin high producing strain34.649
DRR006523Root Summer glycyrrhizin low producing strain5.175
DRR006524Root Summer glycyrrhizin low producing strain5.733
DRR006525Leaf Summer glycyrrhizin high producing strain11.832
DRR006526Leaf Summer glycyrrhizin high producing strain12.376

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.350
SRR2868004Drought Stress(Tissue:root)6.234
SRR2967015Control (Tissue:root)9.673

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.957
SRR9715740Leave3.517
SRR9715741Leave9.982
SRR9715739Root3.352
SRR9715742Root4.201
SRR9715743Root5.131

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.507
SRR8749028MeJA induced 9h11.634
SRR8749029MeJA induced 9h3.934
SRR8749030Uninduced9.368
SRR8749031Uninduced11.147
SRR8749032Uninduced14.489

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.091
SRR8400027Control-Root3.210

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved