Gene detail information of Glyur000304s00027646.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05780.15.00E-160RP non-ATPase subunit 8A
NRKHN34740.10Putative 26S proteasome non-ATPase regulatory subunit 7 [Glycine soja]
Swissprottr|O24412|PSD7A_ARATH026S proteasome non-ATPase regulatory subunit 7 homolog A
trEMBLtr|I1MZ47|I1MZ47_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00304134031138002-


Gene family

Gene familysubfamily
Ubiquitin FamilyJAMM


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000304s00027646.1PF01398.16JAB131171.30E-24
Glyur000304s00027646.1PF13012.1MitMem_reg1702832.00E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.425
SRR1783600control31.372
SRR1783602moderate drought stress22.641
SRR1811619moderate drought stress21.962

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain66.972
DRR006520Root Summer glycyrrhizin high producing strain66.124
DRR006521Root Winter glycyrrhizin high producing strain66.484
DRR006522Root Winter glycyrrhizin high producing strain63.505
DRR006523Root Summer glycyrrhizin low producing strain58.563
DRR006524Root Summer glycyrrhizin low producing strain58.361
DRR006525Leaf Summer glycyrrhizin high producing strain36.220
DRR006526Leaf Summer glycyrrhizin high producing strain36.367

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)147.419
SRR2868004Drought Stress(Tissue:root)123.694
SRR2967015Control (Tissue:root)107.101

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave57.397
SRR9715740Leave58.790
SRR9715741Leave58.416
SRR9715739Root10.799
SRR9715742Root31.275
SRR9715743Root30.821

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h121.673
SRR8749028MeJA induced 9h82.209
SRR8749029MeJA induced 9h87.642
SRR8749030Uninduced57.826
SRR8749031Uninduced39.266
SRR8749032Uninduced43.689

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root112.080
SRR8400027Control-Root107.845

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved