Gene detail information of Glyur000306s00014016.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55370.2 | 3.00E-28 | OBF-binding protein 3 |
| NR | XP_004492130.1 | 1.42E-98 | PREDICTED: dof zinc finger protein DOF5.1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9M2U1|DOF36_ARATH | 2.00E-37 | Dof zinc finger protein DOF3.6 |
| trEMBL | tr|K7K7B3|K7K7B3_SOYBN | 6.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G10250.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 124327 | 126276 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-Dof |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00014016.1 | PF02701.10 | zf-Dof | 85 | 143 | 1.30E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.505 |
| SRR1783600 | control | 1.503 |
| SRR1783602 | moderate drought stress | 0.829 |
| SRR1811619 | moderate drought stress | 0.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.248 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.234 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.676 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.653 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.859 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.914 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.585 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.757 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.499 |
| SRR2967015 | Control (Tissue:root) | 2.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.934 |
| SRR9715740 | Leave | 1.739 |
| SRR9715741 | Leave | 1.572 |
| SRR9715739 | Root | 0.438 |
| SRR9715742 | Root | 1.950 |
| SRR9715743 | Root | 2.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.129 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.582 |
| SRR8400027 | Control-Root | 3.226 |