Gene detail information of Glyur000307s00023008.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00307 | 10440 | 10970 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01883 | CARS, cysS | EC:6.1.1.16 | Aminoacyl-tRNA biosynthesis | map00970 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.412 |
| SRR1783600 | control | 1.530 |
| SRR1783602 | moderate drought stress | 2.461 |
| SRR1811619 | moderate drought stress | 2.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.280 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.782 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.408 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.226 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.926 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.006 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.807 |
| SRR2967015 | Control (Tissue:root) | 2.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.282 |
| SRR9715740 | Leave | 1.609 |
| SRR9715741 | Leave | 2.597 |
| SRR9715739 | Root | 0.290 |
| SRR9715742 | Root | 2.639 |
| SRR9715743 | Root | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.125 |
| SRR8749028 | MeJA induced 9h | 2.048 |
| SRR8749029 | MeJA induced 9h | 0.481 |
| SRR8749030 | Uninduced | 1.323 |
| SRR8749031 | Uninduced | 0.479 |
| SRR8749032 | Uninduced | 1.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.518 |
| SRR8400027 | Control-Root | 3.715 |