Gene detail information of Glyur000307s00023023.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03190.12.00E-55glutathione S-transferase F11
NRXP_004503099.11.35E-116PREDICTED: glutathione S-transferase F11-like [Cicer arietinum]
COGYP_008152065.12.00E-39glutathione S-transferase [Sorangium cellulosum So0157-2]
Swissprottr|Q96324|GSTFB_ARATH2.00E-77Glutathione S-transferase F11
trEMBLtr|G7J8M4|G7J8M4_MEDTR7.00E-114Glutathione S-transferase, amino-terminal domain protein {ECO:0000313|EMBL:AES70901.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00307137522139951-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000307s00023023.1PF02798.15GST_N3752.80E-16
Glyur000307s00023023.1PF00043.20GST_C1351762.40E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.284
SRR1783600control0.484
SRR1783602moderate drought stress0.945
SRR1811619moderate drought stress0.692

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.631
DRR006520Root Summer glycyrrhizin high producing strain0.372
DRR006521Root Winter glycyrrhizin high producing strain0.249
DRR006522Root Winter glycyrrhizin high producing strain0.034
DRR006523Root Summer glycyrrhizin low producing strain0.134
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain1.199
DRR006526Leaf Summer glycyrrhizin high producing strain0.879

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.111
SRR2868004Drought Stress(Tissue:root)0.368
SRR2967015Control (Tissue:root)0.382

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.845
SRR9715740Leave0.599
SRR9715741Leave0.237
SRR9715739Root0.023
SRR9715742Root0.076
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.126
SRR8749028MeJA induced 9h0.666
SRR8749029MeJA induced 9h1.053
SRR8749030Uninduced1.217
SRR8749031Uninduced1.383
SRR8749032Uninduced0.879

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.236
SRR8400027Control-Root0.211

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved