Gene detail information of Glyur000308s00025262.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12720.1 | 1.00E-66 | myb domain protein 67 |
| NR | KHN21370.1 | 3.14E-163 | Transcription factor MYB86 [Glycine soja] |
| Swissprot | tr|Q8LPH6|MYB86_ARATH | 7.00E-60 | Transcription factor MYB86 |
| trEMBL | tr|K7L743|K7L743_SOYBN | 2.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G17371.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00308 | 116153 | 117514 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000308s00025262.1 | PF00249.26 | Myb_DNA-binding | 13 | 44 | 4.30E-07 |
| Glyur000308s00025262.1 | PF00249.26 | Myb_DNA-binding | 90 | 133 | 4.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.953 |
| SRR1783600 | control | 3.699 |
| SRR1783602 | moderate drought stress | 2.800 |
| SRR1811619 | moderate drought stress | 2.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.746 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.148 |
| SRR2967015 | Control (Tissue:root) | 12.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.060 |
| SRR9715739 | Root | 0.703 |
| SRR9715742 | Root | 0.774 |
| SRR9715743 | Root | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.195 |
| SRR8749028 | MeJA induced 9h | 0.217 |
| SRR8749029 | MeJA induced 9h | 0.300 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.877 |
| SRR8400027 | Control-Root | 9.630 |