Gene detail information of Glyur000310s00013607.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16710.21.00E-63glycosyltransferase family protein 28
NRKEH36284.12.33E-113UDP-N-acetylglucosamine transferase subunit alg13 [Medicago truncatula]
COGYP_004772690.13.00E-14glycosyltransferase domain-containing protein [Cyclobacterium marinum DSM 745]
trEMBLtr|A0A072V2M8|A0A072V2M8_MEDTR9.00E-114UDP-N-acetylglucosamine transferase subunit alg13 {ECO:0000313|EMBL:KEH36284.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003105404357168+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07432ALG13 EC:2.4.1.141 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0030259  lipid glycosylation


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000310s00013607.1PF04101.11Glyco_tran_28_C61583.90E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.280
SRR1783600control13.386
SRR1783602moderate drought stress13.391
SRR1811619moderate drought stress13.013

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.990
DRR006520Root Summer glycyrrhizin high producing strain20.446
DRR006521Root Winter glycyrrhizin high producing strain14.550
DRR006522Root Winter glycyrrhizin high producing strain14.197
DRR006523Root Summer glycyrrhizin low producing strain23.659
DRR006524Root Summer glycyrrhizin low producing strain23.074
DRR006525Leaf Summer glycyrrhizin high producing strain10.339
DRR006526Leaf Summer glycyrrhizin high producing strain10.354

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.475
SRR2868004Drought Stress(Tissue:root)22.349
SRR2967015Control (Tissue:root)24.792

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.738
SRR9715740Leave15.307
SRR9715741Leave15.804
SRR9715739Root7.765
SRR9715742Root11.047
SRR9715743Root10.650

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.402
SRR8749028MeJA induced 9h14.298
SRR8749029MeJA induced 9h19.466
SRR8749030Uninduced3.960
SRR8749031Uninduced2.555
SRR8749032Uninduced5.525

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.100
SRR8400027Control-Root20.183

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved