Gene detail information of Glyur000310s00013613.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12890.1 | 2.00E-23 | activator of spomin::LUC2 |
| NR | XP_006598211.1 | 1.09E-82 | PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Glycine max] |
| Swissprot | tr|Q9LKL2|APRR1_ARATH | 5.00E-12 | Two-component response regulator-like APRR1 |
| trEMBL | tr|K7MDZ5|K7MDZ5_SOYBN | 4.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G41030.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00310 | 80906 | 82785 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000310s00013613.1 | PF06203.9 | CCT | 166 | 210 | 2.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.070 |
| SRR1783600 | control | 1.130 |
| SRR1783602 | moderate drought stress | 0.570 |
| SRR1811619 | moderate drought stress | 0.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.907 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.909 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.406 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.472 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.218 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.419 |
| SRR2967015 | Control (Tissue:root) | 0.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.487 |
| SRR9715740 | Leave | 0.347 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.228 |
| SRR9715742 | Root | 2.821 |
| SRR9715743 | Root | 3.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.051 |
| SRR8749030 | Uninduced | 0.015 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.464 |
| SRR8400027 | Control-Root | 4.792 |