Gene detail information of Glyur000310s00013619.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56140.10Leucine-rich repeat transmembrane protein kinase
NRXP_006346232.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like [Solanum tuberosum]
COGYP_004775215.13.00E-29RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGH3|Y5614_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor)
trEMBLtr|A0A061GC43|A0A061GC43_THECC0Leucine-rich repeat transmembrane protein kinase {ECO:0000313|EMBL:EOY27455.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00310101686135234-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
EAR motif-containing Proteinsother


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000310s00013619.5PF00560.28LRR_11501720.41
Glyur000310s00013619.5PF13855.1LRR_81992583.10E-08
Glyur000310s00013619.5PF11721.3Malectin4104718.40E-16
Glyur000310s00013619.5PF07714.12Pkinase_Tyr5537034.60E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.657
SRR1783600control4.647
SRR1783602moderate drought stress5.493
SRR1811619moderate drought stress5.542

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.707
DRR006520Root Summer glycyrrhizin high producing strain6.727
DRR006521Root Winter glycyrrhizin high producing strain18.596
DRR006522Root Winter glycyrrhizin high producing strain17.801
DRR006523Root Summer glycyrrhizin low producing strain8.604
DRR006524Root Summer glycyrrhizin low producing strain8.186
DRR006525Leaf Summer glycyrrhizin high producing strain11.833
DRR006526Leaf Summer glycyrrhizin high producing strain11.633

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.733
SRR2868004Drought Stress(Tissue:root)40.186
SRR2967015Control (Tissue:root)35.796

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.251
SRR9715740Leave19.435
SRR9715741Leave19.051
SRR9715739Root2.186
SRR9715742Root6.619
SRR9715743Root5.585

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.003
SRR8749028MeJA induced 9h15.966
SRR8749029MeJA induced 9h6.214
SRR8749030Uninduced51.448
SRR8749031Uninduced74.372
SRR8749032Uninduced26.549

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.766
SRR8400027Control-Root13.822

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved