Gene detail information of Glyur000310s00013630.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78440.16.00E-103Arabidopsis thaliana gibberellin 2-oxidase 1
NRKEH19494.16.32E-180plant gibberellin 2-oxidase [Medicago truncatula]
COGYP_007565700.13.00E-20putative oxidoreductase [Ilumatobacter coccineus YM16-304]
Swissprottr|Q9SQ80|G2OX1_PEA6.00E-164Gibberellin 2-beta-dioxygenase 1
trEMBLtr|A0A072TPR3|A0A072TPR3_MEDTR2.00E-180Plant gibberellin 2-oxidase {ECO:0000313|EMBL:KEH19494.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00310188291190837+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04125E1.14.11.13 EC:1.14.11.13 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000310s00013630.1PF14226.1DIOX_N301171.50E-15
Glyur000310s00013630.1PF03171.152OG-FeII_Oxy1802863.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.480
SRR1783600control55.854
SRR1783602moderate drought stress30.221
SRR1811619moderate drought stress29.510

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.248
DRR006520Root Summer glycyrrhizin high producing strain0.331
DRR006521Root Winter glycyrrhizin high producing strain6.061
DRR006522Root Winter glycyrrhizin high producing strain6.161
DRR006523Root Summer glycyrrhizin low producing strain0.084
DRR006524Root Summer glycyrrhizin low producing strain0.084
DRR006525Leaf Summer glycyrrhizin high producing strain1.214
DRR006526Leaf Summer glycyrrhizin high producing strain1.135

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.233
SRR2868004Drought Stress(Tissue:root)4.703
SRR2967015Control (Tissue:root)13.213

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.285
SRR9715740Leave1.067
SRR9715741Leave4.841
SRR9715739Root153.508
SRR9715742Root34.418
SRR9715743Root50.504

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.412
SRR8749028MeJA induced 9h0.932
SRR8749029MeJA induced 9h0.200
SRR8749030Uninduced3.639
SRR8749031Uninduced1.275
SRR8749032Uninduced4.654

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.876
SRR8400027Control-Root44.686

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved