Gene detail information of Glyur000311s00024716.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47000.18.00E-34Glycosyl hydrolase family protein
NRXP_007146739.11.33E-45hypothetical protein PHAVU_006G065600g [Phaseolus vulgaris]
COGYP_005529263.12.00E-19beta-glucosidase [Amycolatopsis mediterranei S699]
trEMBLtr|V7BNX5|V7BNX5_PHAVU5.00E-46Uncharacterized protein {ECO:0000313|EMBL:ESW18733.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003117839382958-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05349bglX EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000311s00024716.1PF00933.16Glyco_hydro_3661233.30E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.513
SRR1783600control5.553
SRR1783602moderate drought stress2.817
SRR1811619moderate drought stress2.827

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.774
DRR006520Root Summer glycyrrhizin high producing strain7.465
DRR006521Root Winter glycyrrhizin high producing strain15.589
DRR006522Root Winter glycyrrhizin high producing strain14.990
DRR006523Root Summer glycyrrhizin low producing strain8.163
DRR006524Root Summer glycyrrhizin low producing strain7.962
DRR006525Leaf Summer glycyrrhizin high producing strain4.519
DRR006526Leaf Summer glycyrrhizin high producing strain4.558

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.392
SRR2868004Drought Stress(Tissue:root)5.441
SRR2967015Control (Tissue:root)5.814

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.793
SRR9715740Leave1.261
SRR9715741Leave1.075
SRR9715739Root0.178
SRR9715742Root1.081
SRR9715743Root0.502

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.244
SRR8749028MeJA induced 9h10.188
SRR8749029MeJA induced 9h4.764
SRR8749030Uninduced4.527
SRR8749031Uninduced3.980
SRR8749032Uninduced2.506

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.424
SRR8400027Control-Root6.013