Gene detail information of Glyur000311s00024724.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38620.1 | 2.00E-40 | myb domain protein 4 |
| NR | XP_008229231.1 | 5.77E-69 | PREDICTED: myb-related protein 308-like [Prunus mume] |
| Swissprot | tr|Q9SZP1|MYB4_ARATH | 4.00E-48 | Transcription repressor MYB4 |
| trEMBL | tr|M5WTU2|M5WTU2_PRUPE | 6.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:EMJ17099.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00311 | 154323 | 156359 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000311s00024724.1 | PF00249.26 | Myb_DNA-binding | 13 | 64 | 8.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.970 |
| SRR1783600 | control | 1.765 |
| SRR1783602 | moderate drought stress | 1.606 |
| SRR1811619 | moderate drought stress | 1.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.084 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.059 |
| SRR2967015 | Control (Tissue:root) | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.171 |
| SRR9715740 | Leave | 0.426 |
| SRR9715741 | Leave | 0.505 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.395 |
| SRR8749028 | MeJA induced 9h | 5.916 |
| SRR8749029 | MeJA induced 9h | 1.418 |
| SRR8749030 | Uninduced | 13.674 |
| SRR8749031 | Uninduced | 0.802 |
| SRR8749032 | Uninduced | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.275 |
| SRR8400027 | Control-Root | 0.038 |