Gene detail information of Glyur000312s00021994.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26780.2 | 3.00E-63 | myb domain protein 117 |
| NR | XP_003613837.1 | 1.13E-149 | Myb-like protein AA [Medicago truncatula] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 4.00E-37 | Transcription factor MYB44 |
| trEMBL | tr|G7KGM9|G7KGM9_MEDTR | 4.00E-150 | Myb transcription factor {ECO:0000313|EMBL:AES96795.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00312 | 61474 | 63637 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000312s00021994.1 | PF13921.1 | Myb_DNA-bind_6 | 165 | 225 | 5.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.033 |
| SRR1783600 | control | 0.048 |
| SRR1783602 | moderate drought stress | 0.171 |
| SRR1811619 | moderate drought stress | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.016 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.024 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.043 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.262 |
| SRR8749028 | MeJA induced 9h | 0.164 |
| SRR8749029 | MeJA induced 9h | 0.137 |
| SRR8749030 | Uninduced | 0.005 |
| SRR8749031 | Uninduced | 0.001 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.016 |
| SRR8400027 | Control-Root | 0.083 |