Gene detail information of Glyur000312s00022010.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G26810.10galactosyltransferase1
NRXP_004490069.10PREDICTED: beta-1,3-galactosyltransferase 15-like [Cicer arietinum]
Swissprottr|Q8L7F9|B3GTF_ARATH0Beta-1,3-galactosyltransferase 15
trEMBLtr|G7KFC0|G7KFC0_MEDTR0Beta-1,3-galactosyltransferase-like protein {ECO:0000313|EMBL:AES96766.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00312169327173426-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14413GALT1 EC:2.4.1.- Various types of N-glycan biosynthesis map00513


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0008378  galactosyltransferase activity

GO:0030246  carbohydrate binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000312s00022010.1PF00337.17Gal-bind_lectin1773681.40E-36
Glyur000312s00022010.1PF01762.16Galactosyl_T4125965.60E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.597
SRR1783600control12.454
SRR1783602moderate drought stress7.941
SRR1811619moderate drought stress7.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.675
DRR006520Root Summer glycyrrhizin high producing strain12.939
DRR006521Root Winter glycyrrhizin high producing strain9.452
DRR006522Root Winter glycyrrhizin high producing strain9.107
DRR006523Root Summer glycyrrhizin low producing strain28.816
DRR006524Root Summer glycyrrhizin low producing strain28.976
DRR006525Leaf Summer glycyrrhizin high producing strain14.051
DRR006526Leaf Summer glycyrrhizin high producing strain14.171

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.630
SRR2868004Drought Stress(Tissue:root)36.217
SRR2967015Control (Tissue:root)26.716

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.958
SRR9715740Leave14.748
SRR9715741Leave38.423
SRR9715739Root3.714
SRR9715742Root17.792
SRR9715743Root14.724

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h70.507
SRR8749028MeJA induced 9h32.260
SRR8749029MeJA induced 9h46.344
SRR8749030Uninduced55.834
SRR8749031Uninduced43.902
SRR8749032Uninduced21.886

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.973
SRR8400027Control-Root28.368

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved