Gene detail information of Glyur000313s00016920.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39770.20Glucose-1-phosphate adenylyltransferase family protein
NRXP_004490906.10PREDICTED: mannose-1-phosphate guanylyltransferase 1-like [Cicer arietinum]
COGYP_644397.12.00E-54nucleotidyl transferase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|O22287|GMPP1_ARATH0Mannose-1-phosphate guanylyltransferase 1
trEMBLtr|Q6DW08|Q6DW08_MEDSA0GMPase {ECO:0000313|EMBL:AAT58365.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00313102912107482-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00966GMPP EC:2.7.7.13 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000313s00016920.1PF00483.18NTP_transferase22282.90E-47
Glyur000313s00016920.1PF00132.19Hexapep2612949.90E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.238
SRR1783600control60.391
SRR1783602moderate drought stress45.355
SRR1811619moderate drought stress45.141

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.864
DRR006520Root Summer glycyrrhizin high producing strain40.794
DRR006521Root Winter glycyrrhizin high producing strain37.613
DRR006522Root Winter glycyrrhizin high producing strain36.287
DRR006523Root Summer glycyrrhizin low producing strain41.666
DRR006524Root Summer glycyrrhizin low producing strain41.137
DRR006525Leaf Summer glycyrrhizin high producing strain38.693
DRR006526Leaf Summer glycyrrhizin high producing strain38.627

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)71.214
SRR2868004Drought Stress(Tissue:root)60.862
SRR2967015Control (Tissue:root)61.808

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave81.001
SRR9715740Leave63.844
SRR9715741Leave56.574
SRR9715739Root59.540
SRR9715742Root68.425
SRR9715743Root67.775

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.199
SRR8749028MeJA induced 9h41.137
SRR8749029MeJA induced 9h53.690
SRR8749030Uninduced68.959
SRR8749031Uninduced105.675
SRR8749032Uninduced96.429

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root55.618
SRR8400027Control-Root73.222

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved