Gene detail information of Glyur000313s00016927.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11410.18.00E-107protein phosphatase 2CA
NRXP_004490902.10PREDICTED: protein phosphatase 2C 37-like [Cicer arietinum]
COGYP_004485267.16.00E-08Ser/Thr phosphatase [Methanotorris igneus Kol 5]
Swissprottr|Q9LNW3|P2C03_ARATH2.00E-136Protein phosphatase 2C 3
trEMBLtr|G7KGU9|G7KGU9_MEDTR0Protein phosphatase 2C-like protein {ECO:0000313|EMBL:AES99426.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00313169401172108-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000313s00016927.1PF00481.16PP2C1133967.20E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.582
SRR1783600control12.732
SRR1783602moderate drought stress15.618
SRR1811619moderate drought stress15.745

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain150.518
DRR006520Root Summer glycyrrhizin high producing strain147.644
DRR006521Root Winter glycyrrhizin high producing strain29.484
DRR006522Root Winter glycyrrhizin high producing strain28.486
DRR006523Root Summer glycyrrhizin low producing strain98.356
DRR006524Root Summer glycyrrhizin low producing strain99.749
DRR006525Leaf Summer glycyrrhizin high producing strain50.513
DRR006526Leaf Summer glycyrrhizin high producing strain50.088

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.077
SRR2868004Drought Stress(Tissue:root)52.582
SRR2967015Control (Tissue:root)49.542

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.908
SRR9715740Leave19.480
SRR9715741Leave28.315
SRR9715739Root33.677
SRR9715742Root42.084
SRR9715743Root41.118

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.711
SRR8749028MeJA induced 9h53.890
SRR8749029MeJA induced 9h19.986
SRR8749030Uninduced7.825
SRR8749031Uninduced9.069
SRR8749032Uninduced6.466

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root71.855
SRR8400027Control-Root49.845

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved