Gene detail information of Glyur000313s00016931.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37740.1 | 2.00E-22 | zinc-finger protein 10 |
| NR | XP_006601993.1 | 1.80E-69 | PREDICTED: probable transcriptional regulator RABBIT EARS-like [Glycine max] |
| Swissprot | tr|Q9LHS9|RBE_ARATH | 2.00E-24 | Probable transcriptional regulator RABBIT EARS |
| trEMBL | tr|I1MZA5|I1MZA5_SOYBN | 7.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G04030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00313 | 190527 | 191456 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
| EAR motif-containing Proteins | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.079 |
| SRR1783600 | control | 0.078 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.714 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.882 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.619 |
| SRR2967015 | Control (Tissue:root) | 0.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.065 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.267 |
| SRR9715742 | Root | 0.197 |
| SRR9715743 | Root | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.195 |
| SRR8400027 | Control-Root | 0.218 |