Gene detail information of Glyur000314s00018027.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G03390.10STRUBBELIG-receptor family 3
NRKHN22911.10Protein STRUBBELIG-RECEPTOR FAMILY 3 [Glycine soja]
COGYP_003372407.12.00E-18serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q6R2K3|SRF3_ARATH0Protein STRUBBELIG-RECEPTOR FAMILY 3 (Precursor)
trEMBLtr|V7AGH7|V7AGH7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04639.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00314149312156641+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000314s00018027.1PF13855.1LRR_8991561.10E-07
Glyur000314s00018027.1PF07714.12Pkinase_Tyr4266941.60E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.761
SRR1783600control6.742
SRR1783602moderate drought stress8.657
SRR1811619moderate drought stress8.575

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.236
DRR006520Root Summer glycyrrhizin high producing strain7.160
DRR006521Root Winter glycyrrhizin high producing strain11.358
DRR006522Root Winter glycyrrhizin high producing strain11.281
DRR006523Root Summer glycyrrhizin low producing strain9.401
DRR006524Root Summer glycyrrhizin low producing strain9.424
DRR006525Leaf Summer glycyrrhizin high producing strain5.282
DRR006526Leaf Summer glycyrrhizin high producing strain5.254

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.426
SRR2868004Drought Stress(Tissue:root)22.685
SRR2967015Control (Tissue:root)30.457

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.864
SRR9715740Leave7.147
SRR9715741Leave14.419
SRR9715739Root2.792
SRR9715742Root10.130
SRR9715743Root8.582

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.798
SRR8749028MeJA induced 9h29.772
SRR8749029MeJA induced 9h38.162
SRR8749030Uninduced28.809
SRR8749031Uninduced67.413
SRR8749032Uninduced58.669

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.400
SRR8400027Control-Root19.023

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved