Gene detail information of Glyur000314s00018029.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01470.1 | 4.00E-29 | homeobox 1 |
| NR | KHN13480.1 | 1.30E-144 | Homeobox-leucine zipper protein HAT5 [Glycine soja] |
| Swissprot | tr|Q02283|HAT5_ARATH | 3.00E-33 | Homeobox-leucine zipper protein HAT5 |
| trEMBL | tr|K7L9Q7|K7L9Q7_SOYBN | 3.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G40705.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00314 | 168926 | 171185 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000314s00018029.1 | PF00046.24 | Homeobox | 92 | 145 | 9.50E-16 |
| Glyur000314s00018029.1 | PF02183.13 | HALZ | 147 | 176 | 1.70E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.190 |
| SRR1783600 | control | 32.577 |
| SRR1783602 | moderate drought stress | 1.198 |
| SRR1811619 | moderate drought stress | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.222 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.454 |
| SRR9715740 | Leave | 1.872 |
| SRR9715741 | Leave | 9.107 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.178 |
| SRR9715743 | Root | 0.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.025 |
| SRR8400027 | Control-Root | 0.253 |