Gene detail information of Glyur000315s00012752.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62100.11.00E-19indole-3-acetic acid inducible 30
NRXP_007145089.12.89E-63hypothetical protein PHAVU_007G208800g [Phaseolus vulgaris]
Swissprottr|Q9M1R4|IAA30_ARATH3.00E-23Auxin-responsive protein IAA30
trEMBLtr|V7BJ85|V7BJ85_PHAVU1.00E-63Auxin-induced protein {ECO:0000256|RuleBase:RU004549}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003154044141475+


Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA
EAR motif-containing ProteinsAUX/IAA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0046983  protein dimerization activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000315s00012752.1PF02309.11AUX_IAA521562.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.419
SRR1783600control0.338
SRR1783602moderate drought stress0.486
SRR1811619moderate drought stress0.424

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.551
DRR006520Root Summer glycyrrhizin high producing strain1.692
DRR006521Root Winter glycyrrhizin high producing strain0.136
DRR006522Root Winter glycyrrhizin high producing strain0.172
DRR006523Root Summer glycyrrhizin low producing strain0.219
DRR006524Root Summer glycyrrhizin low producing strain0.351
DRR006525Leaf Summer glycyrrhizin high producing strain1.420
DRR006526Leaf Summer glycyrrhizin high producing strain1.735

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.774
SRR2868004Drought Stress(Tissue:root)3.080
SRR2967015Control (Tissue:root)2.170

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.112
SRR9715740Leave2.979
SRR9715741Leave1.453
SRR9715739Root0.487
SRR9715742Root0.333
SRR9715743Root0.646

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h100.662
SRR8749028MeJA induced 9h84.019
SRR8749029MeJA induced 9h255.244
SRR8749030Uninduced42.536
SRR8749031Uninduced37.873
SRR8749032Uninduced34.160

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.760
SRR8400027Control-Root1.796

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved