Gene detail information of Glyur000315s00012756.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62300.1 | 1.00E-49 | WRKY family transcription factor |
| NR | XP_006604764.1 | 3.88E-133 | PREDICTED: probable WRKY transcription factor 47-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9XEC3|WRK42_ARATH | 1.00E-70 | Probable WRKY transcription factor 42 |
| trEMBL | tr|I1NBI8|I1NBI8_SOYBN | 1.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G40950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00315 | 53315 | 56624 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000315s00012756.1 | PF03106.10 | WRKY | 296 | 354 | 4.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.795 |
| SRR1783600 | control | 12.199 |
| SRR1783602 | moderate drought stress | 20.688 |
| SRR1811619 | moderate drought stress | 20.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.782 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.594 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.227 |
| SRR2967015 | Control (Tissue:root) | 2.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.504 |
| SRR9715740 | Leave | 0.490 |
| SRR9715741 | Leave | 1.061 |
| SRR9715739 | Root | 16.880 |
| SRR9715742 | Root | 8.604 |
| SRR9715743 | Root | 12.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.400 |
| SRR8749028 | MeJA induced 9h | 1.494 |
| SRR8749029 | MeJA induced 9h | 5.556 |
| SRR8749030 | Uninduced | 0.491 |
| SRR8749031 | Uninduced | 2.658 |
| SRR8749032 | Uninduced | 1.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.014 |
| SRR8400027 | Control-Root | 15.506 |