Gene detail information of Glyur000315s00012783.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G65840.10polyamine oxidase 4
NRXP_004503087.10PREDICTED: probable polyamine oxidase 4-like [Cicer arietinum]
COGYP_007568558.12.00E-64Amine oxidase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
Swissprottr|Q8H191|PAO4_ARATH0Probable polyamine oxidase 4
trEMBLtr|G7J7X8|G7J7X8_MEDTR0Flavin containing amine oxidase {ECO:0000313|EMBL:AES70872.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00315163850168819+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17839PAO4, PAO3, PAO2 EC:1.5.3.17 1.5.3.- Arginine and proline metabolism map00330
beta-Alanine metabolismmap00410


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000315s00012783.1PF01593.19Amino_oxidase372196.40E-25
Glyur000315s00012783.1PF01593.19Amino_oxidase2374761.10E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.489
SRR1783600control18.511
SRR1783602moderate drought stress12.162
SRR1811619moderate drought stress12.001

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.939
DRR006520Root Summer glycyrrhizin high producing strain12.826
DRR006521Root Winter glycyrrhizin high producing strain5.656
DRR006522Root Winter glycyrrhizin high producing strain5.482
DRR006523Root Summer glycyrrhizin low producing strain20.314
DRR006524Root Summer glycyrrhizin low producing strain20.007
DRR006525Leaf Summer glycyrrhizin high producing strain10.953
DRR006526Leaf Summer glycyrrhizin high producing strain10.838

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)67.870
SRR2868004Drought Stress(Tissue:root)117.510
SRR2967015Control (Tissue:root)96.383

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.591
SRR9715740Leave29.664
SRR9715741Leave56.631
SRR9715739Root13.776
SRR9715742Root21.939
SRR9715743Root22.053

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.219
SRR8749028MeJA induced 9h37.069
SRR8749029MeJA induced 9h32.818
SRR8749030Uninduced46.466
SRR8749031Uninduced10.534
SRR8749032Uninduced14.969

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.010
SRR8400027Control-Root45.154

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved