Gene detail information of Glyur000316s00018261.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20050.12.00E-134Protein kinase superfamily protein
NRXP_007154965.10hypothetical protein PHAVU_003G161500g [Phaseolus vulgaris]
COGYP_001958461.17.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q94C25|Y5005_ARATH0Probable receptor-like protein kinase At5g20050 (Precursor)
trEMBLtr|V7C9X7|V7C9X7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26959.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003163094732290+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000316s00018261.1PF00069.20Pkinase1073842.00E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.876
SRR1783600control0.903
SRR1783602moderate drought stress0.708
SRR1811619moderate drought stress0.789

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.989
DRR006520Root Summer glycyrrhizin high producing strain2.874
DRR006521Root Winter glycyrrhizin high producing strain0.581
DRR006522Root Winter glycyrrhizin high producing strain0.537
DRR006523Root Summer glycyrrhizin low producing strain6.783
DRR006524Root Summer glycyrrhizin low producing strain7.511
DRR006525Leaf Summer glycyrrhizin high producing strain0.759
DRR006526Leaf Summer glycyrrhizin high producing strain0.757

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.071
SRR2868004Drought Stress(Tissue:root)36.509
SRR2967015Control (Tissue:root)49.736

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.155
SRR9715740Leave10.412
SRR9715741Leave32.996
SRR9715739Root16.543
SRR9715742Root27.328
SRR9715743Root24.354

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.756
SRR8749028MeJA induced 9h1.557
SRR8749029MeJA induced 9h1.570
SRR8749030Uninduced15.287
SRR8749031Uninduced3.744
SRR8749032Uninduced5.833

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.126
SRR8400027Control-Root15.769

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved