Gene detail information of Glyur000316s00018275.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20080.11.00E-143FAD/NAD(P)-binding oxidoreductase
NRKHN27422.10NADH-cytochrome b5 reductase-like protein [Glycine soja]
COGYP_004053693.12.00E-22oxidoreductase fad/nad(p)-binding domain protein [Marivirga tractuosa DSM 4126]
Swissprottr|P83291|NB5R2_ARATH3.00E-180NADH-cytochrome b5 reductase-like protein
trEMBLtr|I1K1F4|I1K1F4_SOYBN0NADH-cytochrome b5 reductase {ECO:0000256|RuleBase:RU361226}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0031699192104159+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00326E1.6.2.2 EC:1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000316s00018275.1PF00970.19FAD_binding_6801824.60E-22
Glyur000316s00018275.1PF00175.16NAD_binding_11922982.40E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control70.689
SRR1783600control71.328
SRR1783602moderate drought stress56.106
SRR1811619moderate drought stress55.139

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain60.923
DRR006520Root Summer glycyrrhizin high producing strain60.388
DRR006521Root Winter glycyrrhizin high producing strain92.789
DRR006522Root Winter glycyrrhizin high producing strain89.671
DRR006523Root Summer glycyrrhizin low producing strain38.998
DRR006524Root Summer glycyrrhizin low producing strain39.470
DRR006525Leaf Summer glycyrrhizin high producing strain52.773
DRR006526Leaf Summer glycyrrhizin high producing strain52.179

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)130.410
SRR2868004Drought Stress(Tissue:root)90.280
SRR2967015Control (Tissue:root)73.908

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave64.037
SRR9715740Leave51.998
SRR9715741Leave61.989
SRR9715739Root19.483
SRR9715742Root52.721
SRR9715743Root44.621

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.860
SRR8749028MeJA induced 9h48.158
SRR8749029MeJA induced 9h48.435
SRR8749030Uninduced35.565
SRR8749031Uninduced17.958
SRR8749032Uninduced18.246

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root81.960
SRR8400027Control-Root82.454

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved