Gene detail information of Glyur000319s00018985.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32800.10protein kinase family protein
NRXP_003520406.20PREDICTED: receptor like protein kinase S.2-like [Glycine max]
COGYP_004902575.15.00E-19putative serine/threonine protein kinase [Kitasatospora setae KM-6054]
Swissprottr|O48837|LRKS2_ARATH0Receptor like protein kinase S.2
trEMBLtr|K7KEA1|K7KEA1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G25380.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00319131518134100+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000319s00018985.1PF00069.20Pkinase1253585.20E-40
Glyur000319s00018985.1PF07714.12Pkinase_Tyr5408221.10E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.170
SRR1783600control9.434
SRR1783602moderate drought stress9.413
SRR1811619moderate drought stress9.227

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.254
DRR006520Root Summer glycyrrhizin high producing strain1.200
DRR006521Root Winter glycyrrhizin high producing strain1.345
DRR006522Root Winter glycyrrhizin high producing strain1.275
DRR006523Root Summer glycyrrhizin low producing strain2.598
DRR006524Root Summer glycyrrhizin low producing strain2.571
DRR006525Leaf Summer glycyrrhizin high producing strain0.216
DRR006526Leaf Summer glycyrrhizin high producing strain0.215

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.593
SRR2868004Drought Stress(Tissue:root)27.196
SRR2967015Control (Tissue:root)14.576

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.650
SRR9715740Leave1.355
SRR9715741Leave0.702
SRR9715739Root4.473
SRR9715742Root6.988
SRR9715743Root6.927

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.412
SRR8749028MeJA induced 9h40.368
SRR8749029MeJA induced 9h37.387
SRR8749030Uninduced16.436
SRR8749031Uninduced99.277
SRR8749032Uninduced69.271

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.601
SRR8400027Control-Root24.612

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved