Gene detail information of Glyur000320s00014320.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23100.3 | 0 | glutamate-cysteine ligase |
| NR | XP_003611086.1 | 0 | Glutamate-cysteine ligase [Medicago truncatula] |
| COG | YP_001411938.1 | 5.00E-174 | glutamate--cysteine ligase [Parvibaculum lavamentivorans DS-1] |
| Swissprot | tr|Q9ZNX6|GSH1_MEDTR | 0 | Glutamate--cysteine ligase, chloroplastic (Precursor) |
| trEMBL | tr|G7KC28|G7KC28_MEDTR | 0 | Glutamate-cysteine ligase B {ECO:0000313|EMBL:AES94044.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00320 | 64892 | 68848 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01919 | gshA | EC:6.3.2.2 | Cysteine and methionine metabolism | map00270 |
| Glutathione metabolism | map00480 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000320s00014320.1 | PF04107.8 | GCS2 | 119 | 410 | 2.80E-80 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.005 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.074 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.219 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.587 |
| SRR2967015 | Control (Tissue:root) | 0.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.154 |
| SRR8400027 | Control-Root | 0.265 |