Gene detail information of Glyur000320s00014335.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63440.10heavy metal atpase 5
NRXP_004511582.10PREDICTED: putative copper-transporting ATPase HMA5-like isoform X1 [Cicer arietinum]
COGYP_007944028.10copper/silver-translocating P-type ATPase [Desulfotomaculum gibsoniae DSM 7213]
Swissprottr|Q9SH30|HMA5_ARATH0Probable copper-transporting ATPase HMA5
trEMBLtr|G7KDC8|G7KDC8_MEDTR0Heavy metal P-type ATPase {ECO:0000313|EMBL:AES94063.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00320155242159566-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17686copA, ATP7 EC:3.6.3.54 MAPK signaling pathway - plant map04016
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006812  cation transport

GO:0030001  metal ion transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0005507  copper ion binding

GO:0019829  cation-transporting ATPase activity

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000320s00014335.1PF00403.21HMA471085.10E-13
Glyur000320s00014335.1PF00403.21HMA1261866.00E-11
Glyur000320s00014335.1PF00122.15E1-E2_ATPase3996393.80E-52
Glyur000320s00014335.1PF00702.21Hydrolase6438653.30E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.167
SRR1783600control5.142
SRR1783602moderate drought stress5.963
SRR1811619moderate drought stress5.917

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.238
DRR006520Root Summer glycyrrhizin high producing strain18.347
DRR006521Root Winter glycyrrhizin high producing strain4.008
DRR006522Root Winter glycyrrhizin high producing strain3.944
DRR006523Root Summer glycyrrhizin low producing strain17.285
DRR006524Root Summer glycyrrhizin low producing strain17.064
DRR006525Leaf Summer glycyrrhizin high producing strain3.341
DRR006526Leaf Summer glycyrrhizin high producing strain3.268

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)111.757
SRR2868004Drought Stress(Tissue:root)168.911
SRR2967015Control (Tissue:root)152.351

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.250
SRR9715740Leave4.383
SRR9715741Leave5.137
SRR9715739Root16.136
SRR9715742Root24.563
SRR9715743Root21.573

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.328
SRR8749028MeJA induced 9h11.171
SRR8749029MeJA induced 9h5.484
SRR8749030Uninduced3.828
SRR8749031Uninduced4.696
SRR8749032Uninduced6.348

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root50.731
SRR8400027Control-Root35.867

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved