Gene detail information of Glyur000320s00014337.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63430.10Leucine-rich repeat protein kinase family protein
NRXP_006573774.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max]
COGYP_004579826.15.00E-20hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|C0LGH8|Y1634_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g63430 (Precursor)
trEMBLtr|I1JA62|I1JA62_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G42770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00320164189168853-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.15.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000320s00014337.1PF08263.7LRRNT_227656.90E-09
Glyur000320s00014337.1PF00560.28LRR_11191411.2
Glyur000320s00014337.1PF07714.12Pkinase_Tyr3386071.00E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.613
SRR1783600control6.538
SRR1783602moderate drought stress6.994
SRR1811619moderate drought stress7.118

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.325
DRR006520Root Summer glycyrrhizin high producing strain8.352
DRR006521Root Winter glycyrrhizin high producing strain1.655
DRR006522Root Winter glycyrrhizin high producing strain1.639
DRR006523Root Summer glycyrrhizin low producing strain14.107
DRR006524Root Summer glycyrrhizin low producing strain14.442
DRR006525Leaf Summer glycyrrhizin high producing strain6.134
DRR006526Leaf Summer glycyrrhizin high producing strain6.236

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.535
SRR2868004Drought Stress(Tissue:root)18.793
SRR2967015Control (Tissue:root)20.543

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.755
SRR9715740Leave5.299
SRR9715741Leave4.127
SRR9715739Root3.524
SRR9715742Root7.892
SRR9715743Root6.993

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.999
SRR8749028MeJA induced 9h2.424
SRR8749029MeJA induced 9h2.658
SRR8749030Uninduced0.553
SRR8749031Uninduced0.183
SRR8749032Uninduced0.445

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.598
SRR8400027Control-Root19.776

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved