Gene detail information of Glyur000321s00019394.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12260.1 | 6.00E-78 | NAC 007 |
| NR | XP_007155625.1 | 2.81E-168 | hypothetical protein PHAVU_003G217600g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FWX2|NAC7_ARATH | 2.00E-117 | NAC domain-containing protein 7 |
| trEMBL | tr|V7CEB3|V7CEB3_PHAVU | 1.00E-168 | Uncharacterized protein {ECO:0000313|EMBL:ESW27620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 43452 | 46049 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000321s00019394.1 | PF02365.10 | NAM | 7 | 53 | 2.40E-16 |
| Glyur000321s00019394.1 | PF02365.10 | NAM | 54 | 105 | 7.40E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.240 |
| SRR1783600 | control | 0.310 |
| SRR1783602 | moderate drought stress | 0.174 |
| SRR1811619 | moderate drought stress | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.853 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.844 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.167 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.867 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.246 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.777 |
| SRR2967015 | Control (Tissue:root) | 2.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.407 |
| SRR9715740 | Leave | 3.691 |
| SRR9715741 | Leave | 0.911 |
| SRR9715739 | Root | 0.042 |
| SRR9715742 | Root | 0.788 |
| SRR9715743 | Root | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.063 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.188 |
| SRR8400027 | Control-Root | 1.551 |