Gene detail information of Glyur000321s00019401.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12230.16.00E-134Aldolase superfamily protein
NRXP_003525805.10PREDICTED: transaldolase-like [Glycine max]
COGYP_007875268.11.00E-43transaldolase B [Raoultella ornithinolytica B6]
trEMBLtr|I1K0L7|I1K0L7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G04300.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003219386998863-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00616E2.2.1.2, talA, talB EC:2.2.1.2 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000321s00019401.2PF00923.14Transaldolase1112251.30E-21
Glyur000321s00019401.2PF00923.14Transaldolase2383731.70E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.317
SRR1783600control60.442
SRR1783602moderate drought stress52.004
SRR1811619moderate drought stress51.870

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain43.512
DRR006520Root Summer glycyrrhizin high producing strain42.879
DRR006521Root Winter glycyrrhizin high producing strain28.131
DRR006522Root Winter glycyrrhizin high producing strain27.602
DRR006523Root Summer glycyrrhizin low producing strain54.413
DRR006524Root Summer glycyrrhizin low producing strain54.230
DRR006525Leaf Summer glycyrrhizin high producing strain50.545
DRR006526Leaf Summer glycyrrhizin high producing strain50.123

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.841
SRR2868004Drought Stress(Tissue:root)56.364
SRR2967015Control (Tissue:root)65.384

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.001
SRR9715740Leave26.696
SRR9715741Leave22.032
SRR9715739Root23.775
SRR9715742Root16.193
SRR9715743Root15.350

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.119
SRR8749028MeJA induced 9h64.737
SRR8749029MeJA induced 9h50.120
SRR8749030Uninduced23.456
SRR8749031Uninduced6.825
SRR8749032Uninduced20.146

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.730
SRR8400027Control-Root49.151

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved