Gene detail information of Glyur000321s00019401.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12230.1 | 6.00E-134 | Aldolase superfamily protein |
| NR | XP_003525805.1 | 0 | PREDICTED: transaldolase-like [Glycine max] |
| COG | YP_007875268.1 | 1.00E-43 | transaldolase B [Raoultella ornithinolytica B6] |
| trEMBL | tr|I1K0L7|I1K0L7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G04300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00321 | 93869 | 98863 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00616 | E2.2.1.2, talA, talB | EC:2.2.1.2 | Carbon metabolism | map01200 |
| Biosynthesis of amino acids | map01230 | |||
| Pentose phosphate pathway | map00030 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.317 |
| SRR1783600 | control | 60.442 |
| SRR1783602 | moderate drought stress | 52.004 |
| SRR1811619 | moderate drought stress | 51.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.512 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.131 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.602 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.413 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.230 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.545 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 50.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 62.841 |
| SRR2868004 | Drought Stress(Tissue:root) | 56.364 |
| SRR2967015 | Control (Tissue:root) | 65.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 28.001 |
| SRR9715740 | Leave | 26.696 |
| SRR9715741 | Leave | 22.032 |
| SRR9715739 | Root | 23.775 |
| SRR9715742 | Root | 16.193 |
| SRR9715743 | Root | 15.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.119 |
| SRR8749028 | MeJA induced 9h | 64.737 |
| SRR8749029 | MeJA induced 9h | 50.120 |
| SRR8749030 | Uninduced | 23.456 |
| SRR8749031 | Uninduced | 6.825 |
| SRR8749032 | Uninduced | 20.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 44.730 |
| SRR8400027 | Control-Root | 49.151 |