Gene detail information of Glyur000322s00020894.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77930.21.00E-107Chaperone DnaJ-domain superfamily protein
NRKEH34859.10transcription factor TGA7, putative [Medicago truncatula]
COGYP_006404307.16.00E-11DnaJ-class molecular chaperone with C-terminal Zn finger domain [Sulfurospirillum barnesii SES-3]
Swissprottr|Q39234|TGA3_ARATH2.00E-123Transcription factor TGA3
trEMBLtr|A0A072UYM3|A0A072UYM3_MEDTR0Transcription factor TGA7, putative {ECO:0000313|EMBL:KEH34859.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003225644663624-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000322s00020894.1PF00170.16bZIP_1711002.80E-08
Glyur000322s00020894.1PF14144.1DOG11582354.30E-26
Glyur000322s00020894.1PF00226.26DnaJ4755428.70E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.036
SRR1783600control16.900
SRR1783602moderate drought stress21.086
SRR1811619moderate drought stress20.825

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.050
DRR006520Root Summer glycyrrhizin high producing strain20.385
DRR006521Root Winter glycyrrhizin high producing strain4.367
DRR006522Root Winter glycyrrhizin high producing strain4.324
DRR006523Root Summer glycyrrhizin low producing strain15.069
DRR006524Root Summer glycyrrhizin low producing strain15.309
DRR006525Leaf Summer glycyrrhizin high producing strain23.721
DRR006526Leaf Summer glycyrrhizin high producing strain23.449

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.474
SRR2868004Drought Stress(Tissue:root)21.829
SRR2967015Control (Tissue:root)23.550

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.385
SRR9715740Leave25.969
SRR9715741Leave23.291
SRR9715739Root4.977
SRR9715742Root9.343
SRR9715743Root8.853

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.581
SRR8749028MeJA induced 9h4.490
SRR8749029MeJA induced 9h2.464
SRR8749030Uninduced7.319
SRR8749031Uninduced3.582
SRR8749032Uninduced3.273

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.571
SRR8400027Control-Root18.358

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved