Gene detail information of Glyur000324s00015423.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23620.1 | 2.00E-28 | methyl esterase 1 |
| NR | KEH20488.1 | 7.70E-72 | methylesterase [Medicago truncatula] |
| Swissprot | tr|Q6RYA0|SABP2_TOBAC | 4.00E-50 | Salicylic acid-binding protein 2 |
| trEMBL | tr|A0A072TUI1|A0A072TUI1_MEDTR | 3.00E-72 | Methylesterase {ECO:0000313|EMBL:KEH20488.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00324 | 315 | 867 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08233 | E3.1.1.78 | EC:3.1.1.78 | Indole alkaloid biosynthesis | map00901 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.542 |
| SRR1783600 | control | 30.663 |
| SRR1783602 | moderate drought stress | 46.201 |
| SRR1811619 | moderate drought stress | 47.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.047 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.036 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 45.474 |
| SRR2868004 | Drought Stress(Tissue:root) | 80.422 |
| SRR2967015 | Control (Tissue:root) | 107.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 66.276 |
| SRR9715740 | Leave | 91.054 |
| SRR9715741 | Leave | 61.230 |
| SRR9715739 | Root | 4.662 |
| SRR9715742 | Root | 29.700 |
| SRR9715743 | Root | 25.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.326 |
| SRR8749029 | MeJA induced 9h | 0.437 |
| SRR8749030 | Uninduced | 58.265 |
| SRR8749031 | Uninduced | 131.020 |
| SRR8749032 | Uninduced | 49.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 110.082 |
| SRR8400027 | Control-Root | 41.320 |