Gene detail information of Glyur000324s00015445.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26270.10phosphofructokinase 3
NRXP_003630681.106-phosphofructokinase [Medicago truncatula]
COGYP_003804939.15.00E-128phosphofructokinase [Spirochaeta smaragdinae DSM 11293]
Swissprottr|Q94AA4|PFKA3_ARATH0ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|G7L7C4|G7L7C4_MEDTR06-phosphofructokinase {ECO:0000313|EMBL:AET05157.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00324148864152903+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000324s00015445.1PF00365.15PFK943367.00E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.237
SRR1783600control1.228
SRR1783602moderate drought stress0.577
SRR1811619moderate drought stress0.576

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.535
DRR006520Root Summer glycyrrhizin high producing strain1.592
DRR006521Root Winter glycyrrhizin high producing strain0.602
DRR006522Root Winter glycyrrhizin high producing strain0.526
DRR006523Root Summer glycyrrhizin low producing strain2.481
DRR006524Root Summer glycyrrhizin low producing strain2.655
DRR006525Leaf Summer glycyrrhizin high producing strain3.133
DRR006526Leaf Summer glycyrrhizin high producing strain2.946

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.336
SRR2868004Drought Stress(Tissue:root)1.913
SRR2967015Control (Tissue:root)1.015

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.659
SRR9715740Leave30.348
SRR9715741Leave47.049
SRR9715739Root2.581
SRR9715742Root7.577
SRR9715743Root6.107

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.026
SRR8749028MeJA induced 9h24.546
SRR8749029MeJA induced 9h63.703
SRR8749030Uninduced9.505
SRR8749031Uninduced55.885
SRR8749032Uninduced59.965

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.805
SRR8400027Control-Root5.188

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved