Gene detail information of Glyur000324s00015449.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G19800.11.00E-140myo-inositol oxygenase 2
NRXP_003630676.10Inositol oxygenase [Medicago truncatula]
Swissprottr|O82200|MIOX2_ARATH6.00E-173Inositol oxygenase 2
trEMBLtr|G7LJN9|G7LJN9_MEDTR0Myo-inositol oxygenase {ECO:0000313|EMBL:AET05152.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00324169722182800-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00469MIOX EC:1.13.99.1 Ascorbate and aldarate metabolism map00053
Inositol phosphate metabolismmap00562


Gene Ontology

biological_process

GO:0019310  inositol catabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0005506  iron ion binding

GO:0050113  inositol oxygenase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000324s00015449.1PF05153.10DUF7061223666.80E-120
Glyur000324s00015449.1PF05153.10DUF7064075511.50E-70
Glyur000324s00015449.1PF05153.10DUF7065525792.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.235
SRR1783600control0.223
SRR1783602moderate drought stress1.081
SRR1811619moderate drought stress1.098

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain33.348
DRR006526Leaf Summer glycyrrhizin high producing strain34.106

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.730
SRR2868004Drought Stress(Tissue:root)36.306
SRR2967015Control (Tissue:root)31.734

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.352
SRR9715740Leave51.121
SRR9715741Leave30.582
SRR9715739Root0.001
SRR9715742Root0.102
SRR9715743Root0.256

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.829
SRR8749028MeJA induced 9h88.451
SRR8749029MeJA induced 9h32.166
SRR8749030Uninduced129.184
SRR8749031Uninduced858.960
SRR8749032Uninduced551.783

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.606
SRR8400027Control-Root8.904

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved