Gene detail information of Glyur000325s00013515.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G07630.22.00E-143arogenate dehydratase 2
NRXP_004505948.10PREDICTED: arogenate dehydratase/prephenate dehydratase 2, chloroplastic-like [Cicer arietinum]
COGYP_004172970.15.00E-75prephenate dehydratase [Anaerolinea thermophila UNI-1]
Swissprottr|Q9SSE7|AROD2_ARATH4.00E-179Arogenate dehydratase/prephenate dehydratase 2, chloroplastic (Precursor)
trEMBLtr|I1LKB8|I1LKB8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G15750.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00325173493178729+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05359ADT, PDT EC:4.2.1.91 4.2.1.51 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009094  L-phenylalanine biosynthetic process


molecular_function

GO:0004664  prephenate dehydratase activity

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000325s00013515.1PF00800.13PDT1132803.80E-50
Glyur000325s00013515.1PF01842.20ACT2913295.80E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.255
SRR1783600control8.364
SRR1783602moderate drought stress6.477
SRR1811619moderate drought stress6.416

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.309
DRR006520Root Summer glycyrrhizin high producing strain6.350
DRR006521Root Winter glycyrrhizin high producing strain6.377
DRR006522Root Winter glycyrrhizin high producing strain6.005
DRR006523Root Summer glycyrrhizin low producing strain7.553
DRR006524Root Summer glycyrrhizin low producing strain7.215
DRR006525Leaf Summer glycyrrhizin high producing strain7.107
DRR006526Leaf Summer glycyrrhizin high producing strain6.876

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.655
SRR2868004Drought Stress(Tissue:root)12.400
SRR2967015Control (Tissue:root)11.436

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.835
SRR9715740Leave6.164
SRR9715741Leave6.986
SRR9715739Root6.043
SRR9715742Root6.409
SRR9715743Root5.999

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.398
SRR8749028MeJA induced 9h18.449
SRR8749029MeJA induced 9h19.745
SRR8749030Uninduced8.521
SRR8749031Uninduced8.770
SRR8749032Uninduced10.295

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.867
SRR8400027Control-Root8.609

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved