Gene detail information of Glyur000325s00013518.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT3G45640.1 | 7.00E-179 | mitogen-activated protein kinase 3 |
NR | AAF73236.1 | 0 | MAP kinase 3 [Pisum sativum] |
COG | YP_003112167.1 | 8.00E-22 | serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] |
Swissprot | tr|Q39023|MPK3_ARATH | 0 | Mitogen-activated protein kinase 3 |
trEMBL | tr|Q9M6S1|Q9M6S1_PEA | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00325 | 185973 | 189395 | - |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:4.5.1 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K20536 | MPK3 | EC:2.7.11.24 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000325s00013518.1 | PF00069.20 | Pkinase | 44 | 325 | 5.30E-76 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 30.854 |
SRR1783600 | control | 30.649 |
SRR1783602 | moderate drought stress | 21.993 |
SRR1811619 | moderate drought stress | 21.715 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 184.611 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 182.723 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 37.931 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 36.767 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 400.607 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 411.196 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.147 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 63.912 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 57.264 |
SRR2868004 | Drought Stress(Tissue:root) | 127.240 |
SRR2967015 | Control (Tissue:root) | 119.601 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 180.127 |
SRR9715740 | Leave | 184.355 |
SRR9715741 | Leave | 230.082 |
SRR9715739 | Root | 126.101 |
SRR9715742 | Root | 334.746 |
SRR9715743 | Root | 297.479 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 206.878 |
SRR8749028 | MeJA induced 9h | 207.551 |
SRR8749029 | MeJA induced 9h | 225.629 |
SRR8749030 | Uninduced | 260.624 |
SRR8749031 | Uninduced | 140.639 |
SRR8749032 | Uninduced | 142.815 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 33.578 |
SRR8400027 | Control-Root | 83.925 |