Gene detail information of Glyur000327s00026459.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03300.1 | 9.00E-134 | adenosine kinase 2 |
| NR | AFK38570.1 | 0 | unknown [Lotus japonicus] |
| COG | YP_722869.1 | 1.00E-11 | PfkB protein [Trichodesmium erythraeum IMS101] |
| Swissprot | tr|Q9LZG0|ADK2_ARATH | 1.00E-167 | Adenosine kinase 2 |
| trEMBL | tr|I3SE78|I3SE78_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK38570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00327 | 70485 | 74536 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00856 | E2.7.1.20, ADK | EC:2.7.1.20 | Purine metabolism | map00230 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000327s00026459.1 | PF00294.19 | PfkB | 25 | 277 | 9.30E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 259.378 |
| SRR1783600 | control | 259.561 |
| SRR1783602 | moderate drought stress | 134.415 |
| SRR1811619 | moderate drought stress | 132.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 216.112 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 210.589 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 125.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 120.563 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 119.837 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 118.247 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 156.585 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 151.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 498.392 |
| SRR2868004 | Drought Stress(Tissue:root) | 275.633 |
| SRR2967015 | Control (Tissue:root) | 253.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 217.415 |
| SRR9715740 | Leave | 152.051 |
| SRR9715741 | Leave | 189.147 |
| SRR9715739 | Root | 198.891 |
| SRR9715742 | Root | 212.292 |
| SRR9715743 | Root | 206.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 352.131 |
| SRR8749028 | MeJA induced 9h | 267.414 |
| SRR8749029 | MeJA induced 9h | 175.858 |
| SRR8749030 | Uninduced | 124.002 |
| SRR8749031 | Uninduced | 93.088 |
| SRR8749032 | Uninduced | 83.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 406.546 |
| SRR8400027 | Control-Root | 403.759 |