Gene detail information of Glyur000327s00026459.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G03300.1 | 9.00E-134 | adenosine kinase 2 |
NR | AFK38570.1 | 0 | unknown [Lotus japonicus] |
COG | YP_722869.1 | 1.00E-11 | PfkB protein [Trichodesmium erythraeum IMS101] |
Swissprot | tr|Q9LZG0|ADK2_ARATH | 1.00E-167 | Adenosine kinase 2 |
trEMBL | tr|I3SE78|I3SE78_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK38570.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00327 | 70485 | 74536 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K00856 | E2.7.1.20, ADK | EC:2.7.1.20 | Purine metabolism | map00230 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000327s00026459.1 | PF00294.19 | PfkB | 25 | 277 | 9.30E-41 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 259.378 |
SRR1783600 | control | 259.561 |
SRR1783602 | moderate drought stress | 134.415 |
SRR1811619 | moderate drought stress | 132.662 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 216.112 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 210.589 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 125.022 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 120.563 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 119.837 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 118.247 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 156.585 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 151.426 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 498.392 |
SRR2868004 | Drought Stress(Tissue:root) | 275.633 |
SRR2967015 | Control (Tissue:root) | 253.611 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 217.415 |
SRR9715740 | Leave | 152.051 |
SRR9715741 | Leave | 189.147 |
SRR9715739 | Root | 198.891 |
SRR9715742 | Root | 212.292 |
SRR9715743 | Root | 206.411 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 352.131 |
SRR8749028 | MeJA induced 9h | 267.414 |
SRR8749029 | MeJA induced 9h | 175.858 |
SRR8749030 | Uninduced | 124.002 |
SRR8749031 | Uninduced | 93.088 |
SRR8749032 | Uninduced | 83.072 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 406.546 |
SRR8400027 | Control-Root | 403.759 |