Gene detail information of Glyur000327s00026461.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G37040.10PHE ammonia lyase 1
NRAAX84839.10phenylalanine ammonia-lyase [Astragalus mongholicus]
COGYP_007127054.19.00E-85histidine ammonia-lyase [Gloeocapsa sp. PCC 7428]
Swissprottr|P27991|PAL1_SOYBN0Phenylalanine ammonia-lyase 1
trEMBLtr|Q52QH3|Q52QH3_ASTMO0Phenylalanine ammonia-lyase {ECO:0000256|RuleBase:RU003955}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003278604391031-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10775PAL EC:4.3.1.24 Phenylalanine metabolism map00360
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0006559  L-phenylalanine catabolic process

GO:0009058  biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0016841  ammonia-lyase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000327s00026461.1PF00221.14Lyase_aromatic1276191.20E-172


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control150.951
SRR1783600control150.121
SRR1783602moderate drought stress114.568
SRR1811619moderate drought stress113.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.805
DRR006520Root Summer glycyrrhizin high producing strain34.930
DRR006521Root Winter glycyrrhizin high producing strain0.554
DRR006522Root Winter glycyrrhizin high producing strain0.465
DRR006523Root Summer glycyrrhizin low producing strain20.559
DRR006524Root Summer glycyrrhizin low producing strain19.562
DRR006525Leaf Summer glycyrrhizin high producing strain120.501
DRR006526Leaf Summer glycyrrhizin high producing strain118.359

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)456.222
SRR2868004Drought Stress(Tissue:root)446.767
SRR2967015Control (Tissue:root)434.952

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave327.025
SRR9715740Leave296.095
SRR9715741Leave363.099
SRR9715739Root351.851
SRR9715742Root486.690
SRR9715743Root449.709

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.986
SRR8749028MeJA induced 9h108.269
SRR8749029MeJA induced 9h20.332
SRR8749030Uninduced297.740
SRR8749031Uninduced161.078
SRR8749032Uninduced90.358

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root346.224
SRR8400027Control-Root250.054

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved