Gene detail information of Glyur000328s00018339.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26980.40CBL-interacting protein kinase 3
NRXP_004491203.10PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like isoform X2 [Cicer arietinum]
COGYP_002432751.13.00E-24serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
Swissprottr|Q2V452|CIPK3_ARATH0CBL-interacting serine/threonine-protein kinase 3
trEMBLtr|Q53VM3|Q53VM3_LOTJA0Ser/Thr protein kinase {ECO:0000313|EMBL:BAD95889.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00328134233141144-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000328s00018339.1PF00069.20Pkinase13809.40E-12
Glyur000328s00018339.1PF00069.20Pkinase811864.40E-36
Glyur000328s00018339.1PF03822.9NAF2653251.40E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.428
SRR1783600control22.415
SRR1783602moderate drought stress24.561
SRR1811619moderate drought stress24.227

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.910
DRR006520Root Summer glycyrrhizin high producing strain38.311
DRR006521Root Winter glycyrrhizin high producing strain32.286
DRR006522Root Winter glycyrrhizin high producing strain30.942
DRR006523Root Summer glycyrrhizin low producing strain28.020
DRR006524Root Summer glycyrrhizin low producing strain27.629
DRR006525Leaf Summer glycyrrhizin high producing strain16.317
DRR006526Leaf Summer glycyrrhizin high producing strain15.972

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)78.617
SRR2868004Drought Stress(Tissue:root)81.357
SRR2967015Control (Tissue:root)94.959

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave71.515
SRR9715740Leave76.836
SRR9715741Leave66.765
SRR9715739Root5.868
SRR9715742Root17.378
SRR9715743Root15.321

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.401
SRR8749028MeJA induced 9h71.876
SRR8749029MeJA induced 9h63.002
SRR8749030Uninduced79.613
SRR8749031Uninduced75.784
SRR8749032Uninduced63.709

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root115.246
SRR8400027Control-Root142.310

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved