Gene detail information of Glyur000329s00019815.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20570.1 | 5.00E-53 | GBF's pro-rich region-interacting factor 1 |
| NR | XP_004487197.1 | 1.91E-144 | PREDICTED: probable transcription factor GLK1-like [Cicer arietinum] |
| Swissprot | tr|Q9SIV3|GLK1_ARATH | 2.00E-68 | Transcription activator GLK1 |
| trEMBL | tr|I1LUI9|I1LUI9_SOYBN | 4.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00329 | 456 | 5008 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000329s00019815.1 | PF00249.26 | Myb_DNA-binding | 178 | 227 | 1.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.716 |
| SRR1783600 | control | 8.883 |
| SRR1783602 | moderate drought stress | 13.438 |
| SRR1811619 | moderate drought stress | 14.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.010 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.006 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.440 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.321 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.474 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.985 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 86.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.257 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.702 |
| SRR2967015 | Control (Tissue:root) | 0.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 92.760 |
| SRR9715740 | Leave | 86.564 |
| SRR9715741 | Leave | 91.615 |
| SRR9715739 | Root | 2.454 |
| SRR9715742 | Root | 4.916 |
| SRR9715743 | Root | 4.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.022 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.763 |
| SRR8400027 | Control-Root | 6.428 |