Gene detail information of Glyur000329s00019822.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28500.1 | 5.00E-84 | NAC domain containing protein 73 |
| NR | XP_004487194.1 | 2.86E-168 | PREDICTED: NAC domain-containing protein 8-like [Cicer arietinum] |
| Swissprot | tr|Q6NQK2|NAC8_ARATH | 7.00E-65 | NAC domain-containing protein 8 |
| trEMBL | tr|I1LUJ2|I1LUJ2_SOYBN | 1.00E-162 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00329 | 44994 | 46898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000329s00019822.1 | PF02365.10 | NAM | 37 | 177 | 3.40E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.710 |
| SRR1783600 | control | 4.634 |
| SRR1783602 | moderate drought stress | 3.239 |
| SRR1811619 | moderate drought stress | 3.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.198 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.915 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.178 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.809 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.543 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.372 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.847 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.494 |
| SRR2967015 | Control (Tissue:root) | 11.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.510 |
| SRR9715740 | Leave | 5.455 |
| SRR9715741 | Leave | 1.375 |
| SRR9715739 | Root | 0.521 |
| SRR9715742 | Root | 4.649 |
| SRR9715743 | Root | 2.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.087 |
| SRR8749028 | MeJA induced 9h | 1.019 |
| SRR8749029 | MeJA induced 9h | 0.450 |
| SRR8749030 | Uninduced | 0.057 |
| SRR8749031 | Uninduced | 0.352 |
| SRR8749032 | Uninduced | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.741 |
| SRR8400027 | Control-Root | 12.657 |