Gene detail information of Glyur000329s00019834.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06290.1 | 3.00E-34 | acyl-CoA oxidase 3 |
| NR | NP_001280826.1 | 1.70E-47 | acyl-coenzyme A oxidase 3, peroxisomal-like [Malus domestica] |
| Swissprot | tr|P0CZ23|ACOX3_ARATH | 4.00E-39 | Acyl-coenzyme A oxidase 3, peroxisomal (Precursor) |
| trEMBL | tr|G8XNW7|G8XNW7_MALDO | 6.00E-48 | Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00329 | 87963 | 88371 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.365 |
| SRR1783600 | control | 0.247 |
| SRR1783602 | moderate drought stress | 0.077 |
| SRR1811619 | moderate drought stress | 0.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.259 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.676 |
| SRR2967015 | Control (Tissue:root) | 0.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.279 |
| SRR9715740 | Leave | 0.585 |
| SRR9715741 | Leave | 0.669 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.936 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.270 |
| SRR8749031 | Uninduced | 0.452 |
| SRR8749032 | Uninduced | 0.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.510 |
| SRR8400027 | Control-Root | 0.457 |