Gene detail information of Glyur000330s00019538.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01420.16.00E-156Peroxidase superfamily protein
NRXP_007151112.10hypothetical protein PHAVU_004G018900g [Phaseolus vulgaris]
Swissprottr|Q9SGH6|DOX1_ARATH0Alpha-dioxygenase 1 (Precursor)
trEMBLtr|V7C2I2|V7C2I2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW23106.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00330193489195616-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10529DOX1 EC:1.-.-.- alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000330s00019538.1PF03098.10An_peroxidase23181.70E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.619
SRR1783600control23.449
SRR1783602moderate drought stress28.073
SRR1811619moderate drought stress28.240

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.390
DRR006520Root Summer glycyrrhizin high producing strain2.455
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.913
DRR006524Root Summer glycyrrhizin low producing strain0.899
DRR006525Leaf Summer glycyrrhizin high producing strain5.178
DRR006526Leaf Summer glycyrrhizin high producing strain4.929

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)135.035
SRR2868004Drought Stress(Tissue:root)349.460
SRR2967015Control (Tissue:root)344.346

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.946
SRR9715740Leave0.057
SRR9715741Leave14.804
SRR9715739Root6.952
SRR9715742Root44.746
SRR9715743Root37.396

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.640
SRR8749028MeJA induced 9h100.024
SRR8749029MeJA induced 9h76.734
SRR8749030Uninduced1083.102
SRR8749031Uninduced1961.062
SRR8749032Uninduced1070.393

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root142.527
SRR8400027Control-Root83.736

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved